Structure of PDB 3six Chain A

Receptor sequence
>3sixA (length=292) Species: 133505 (Bradyrhizobium sp. WM9) [Search protein sequence]
KERFVISRRRTGFGDCLWSLASAWSYAQRTGRTLVIDWRGSCYVEQPFSN
AFPAFFEPVEDIAGVPVICDDRVNQLSFPGPFFPRWWNRPSIDCINRPDE
QIFRERDELTELFQAREDSEANTIVCDACLMWRCSEEAERLIFRNIKLRS
EIRARIDALYEEHFSGHSIIGVHVRHADSELALHQVCMAIRKAKALSYPK
PVKVFLCTDSAQVLDQVSGLFPDVFAVPKRSAEMGIEGGASALIDMYLLA
RCATVIRFPPTSAFTRYARLLVPRIIEFDLSNPGHLTMIDNP
3D structure
PDB3six Structures of NodZ alpha-1,6-fucosyltransferase in complex with GDP and GDP-fucose
ChainA
Resolution2.35 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number 2.4.1.-
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 GDP A H175 R177 A267 F289 H173 R175 A242 F264
BS02 PO4 A E59 R151 S152 E57 R149 S150
Gene Ontology
Molecular Function
GO:0016757 glycosyltransferase activity
GO:0016758 hexosyltransferase activity
Biological Process
GO:0009312 oligosaccharide biosynthetic process

View graph for
Molecular Function
View graph for
Biological Process
External links
PDB RCSB:3six, PDBe:3six, PDBj:3six
PDBsum3six
PubMed22281745
UniProtQ9AQ17

[Back to BioLiP]