Structure of PDB 3sis Chain A

Receptor sequence
>3sisA (length=163) Species: 31578 (Porcine rotavirus (serotype 3 / strain CRW-8)) [Search protein sequence]
GSLLDGPYQPTTFNPPTSYWILLAPTVEGVVIQGTNNIDRWLATILIEPN
VQTTNRIYNLFGQQVTLSVENTSQTQWKFIDVSKTTPTGNYTQHGPLFST
PKLYAVMKFSGRIYTYNGTTPNATTGYYSTTNYDTVNMTSFCDFYIIPRN
QEEKCTEYINHGL
3D structure
PDB3sis Novel structural insights into rotavirus recognition of ganglioside glycan receptors.
ChainA
Resolution2.2 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 MN0 A R101 H155 G187 Y188 Y189 S190 R40 H94 G126 Y127 Y128 S129
Gene Ontology
Biological Process
GO:0019058 viral life cycle
Cellular Component
GO:0019028 viral capsid

View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:3sis, PDBe:3sis, PDBj:3sis
PDBsum3sis
PubMed21945555
UniProtP0C6Y8|VP4_ROTP3 Outer capsid protein VP4

[Back to BioLiP]