Structure of PDB 3sdv Chain A

Receptor sequence
>3sdvA (length=775) Species: 46611 (Abies grandis) [Search protein sequence]
WGYDLVHSLKSPYIDSSYRERAEVLVSEIKAMLNPAITGDGESMITPSAY
DTAWVARVPAIDGSARPQFPQTVDWILKNQLKDGSWGIQSHFLLSDRLLA
TLSCVLVLLKWNVGDLQVEQGIEFIKSNLELVKDETDQDSLVTDFEIIFP
SLLREAQSLRLGLPYDLPYIHLLQTKRQERLAKLSREEIYAVPSPLLYSL
EGIQDIVEWERIMEVQSQDGSFLSSPASTACVFMHTGDAKCLEFLNSVMI
KFGNFVPCLYPVDLLERLLIVDNIVRLGIYRHFEKEIKEALDYVYRHWNE
RGIGWGRLNPIADLETTALGFRLLRLHRYNVSPAIFDNFKDAKFICSTGQ
FNKDVASMLNLYRASQLAFPGENILDEAKSFATKYLREALEKSETSSAWN
NKQNLSQEIKYALKTSWHASVPRVEAKRYCQVYRPDYARIAKCVYKLPYV
NNEKFLELGKLDFNIIQSIHQEEMKNVTSWFRDSGLPLFTFARERPLEFY
FLVAAGTYEPQYAKCRFLFTKVACLQTVLDDMYDTYGTLDELKLFTEAVR
RWDLSFTENLPDYMKLCYQIYYDIVHEVAWEAEKEQGRELVSFFRKGWED
YLLGYYEEAEWLAAEYVPTLDEYIKNGITSIGQRILLLSGVLIMDGQLLS
QEALEKVDYPGRRVLTELNSLISRLADDTKTYKALASSIECYMKDHPECT
EEEALDHIYSILEPAVKELTREFLKPDDVPFACKKMLFEETRVTMVIFKD
GDGFGVSKLEVKDHIKECLIEPLPL
3D structure
PDB3sdv Structure of a three-domain sesquiterpene synthase: a prospective target for advanced biofuels production.
ChainA
Resolution2.2 Å
3D
structure
Catalytic site residues are labeled in the structure
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Enzymatic activity
Catalytic site (original residue number in PDB) R529 L538 A559 D566 D570 S666 I667 G668 R710 D713 T717 F790 D794 F796
Catalytic site (residue number reindexed from 1) R493 L502 A523 D530 D534 S630 I631 G632 R674 D677 T681 F748 D752 F754
Enzyme Commision number 4.2.3.38: alpha-bisabolene synthase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 MG A D566 D570 D530 D534
BS02 MG A D566 D570 D530 D534
BS03 911 A D566 D570 R710 D713 D530 D534 R674 D677
Gene Ontology
Molecular Function
GO:0000287 magnesium ion binding
GO:0003824 catalytic activity
GO:0010333 terpene synthase activity
GO:0016829 lyase activity
GO:0046872 metal ion binding
GO:0052681 alpha-bisabolene synthase activity
Biological Process
GO:0008299 isoprenoid biosynthetic process
GO:0016102 diterpenoid biosynthetic process
Cellular Component
GO:0005737 cytoplasm

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:3sdv, PDBe:3sdv, PDBj:3sdv
PDBsum3sdv
PubMed22153510
UniProtO81086|TPSD1_ABIGR Alpha-bisabolene synthase (Gene Name=ag1)

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