Structure of PDB 3scm Chain A

Receptor sequence
>3scmA (length=289) Species: 10090 (Mus musculus) [Search protein sequence]
NYTFRCLQMSSFANRSWSRTDSVVWLGDLQTHRWSNDSATISFTKPWSQG
KLSNQQWEKLQHMFQVYRVSFTRDIQELVKMMSPKEDYPIEIQLSAGCEM
YPGNASESFLHVAFQGKYVVRFWGTSWQTVPGAPSWLDLPIKVLNADQGT
SATVQMLLNDTCPLFVRGLLEAGKSDLEKQEKPVAWLSSVPSSAHGHRQL
VCHVSGFYPKPVWVMWMRGDQEQQGTHRGDFLPNADETWYLQATLDVEAG
EEAGLACRVKHSSLGGQDIILYWGSLHHILDAQKMVWNH
3D structure
PDB3scm Recognition of beta-linked self glycolipids mediated by natural killer T cell antigen receptors
ChainA
Resolution2.5 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 LGN A V30 F70 Y73 S76 D80 W133 W142 G155 T156 T159 V160 M162 F171 V24 F64 Y67 S70 D74 W127 W136 G149 T150 T153 V154 M156 F165
External links
PDB RCSB:3scm, PDBe:3scm, PDBj:3scm
PDBsum3scm
PubMed21804559
UniProtP11609|CD1D1_MOUSE Antigen-presenting glycoprotein CD1d1 (Gene Name=Cd1d1)

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