Structure of PDB 3rtq Chain A

Receptor sequence
>3rtqA (length=268) Species: 10090 (Mus musculus) [Search protein sequence]
NYTFRCLQMSSFANRSWSRTDSVVWLGDLQTHRWSNDSATISFTKPWSQG
KLSNQQWEKLQHMFQVYRVSFTRDIQELVKMMSPKEDYPIEIQLSAGCEM
YPGNASESFLHVAFQGKYVVRFWGTSWQTVPGAPSWLDLPIKVLNADQGT
SATVQMLLNDTCPLFVRGLLEAGKSDLEKQEKPVAWLSSVPSRQLVCHVS
GFYPKPVWVMWMRGDQEQQGTHRGDFLPNADETWYLQATLDVEAGEEAGL
ACRVKHSSLGGQDIILYW
3D structure
PDB3rtq Structural and functional characterization of a novel nonglycosidic type I NKT agonist with immunomodulatory properties.
ChainA
Resolution2.8 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 FUL A S114 W129 G130 S108 W123 G124
BS02 H4S A C12 S28 V30 F70 Y73 S76 D80 W133 L150 D153 G155 T156 V160 F171 C6 S22 V24 F64 Y67 S70 D74 W127 L144 D147 G149 T150 V154 F165
External links
PDB RCSB:3rtq, PDBe:3rtq, PDBj:3rtq
PDBsum3rtq
PubMed22301545
UniProtP11609|CD1D1_MOUSE Antigen-presenting glycoprotein CD1d1 (Gene Name=Cd1d1)

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