Structure of PDB 3rs6 Chain A

Receptor sequence
>3rs6A (length=232) Species: 167618 (Dioclea virgata) [Search protein sequence]
ADTIVAVELDSYPNTDIGDPSYPHIGIDIKSVRSKSTARWNMQTGKVGTA
HISYNSVAKRLSAVVSYTGSSSTTVSYDVDLNNVLPEWVRVGLSATTGLY
KETNTILSWSFTSKLKTANSLHFSFNQFSQNPKDLILQGDATTDSDGNLQ
LTRVSSDGSPQGSSVGRALFYAPVHIWEKSAVVASFDATFTFLIKSPDRD
PADGITFFIANTDTSIPSGSGGRLLGLFPDAN
3D structure
PDB3rs6 Structure of Dioclea virgata lectin: Relations between carbohydrate binding site and nitric oxide production.
ChainA
Resolution1.8 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 MN A E8 D10 D19 H24 E8 D10 D19 H24
BS02 CA A D10 Y12 N14 D19 D10 Y12 N14 D19
BS03 XMM A Y12 N14 L99 Y100 A207 D208 R228 Y12 N14 L99 Y100 A202 D203 R223
Gene Ontology
Molecular Function
GO:0005537 D-mannose binding
GO:0030246 carbohydrate binding
GO:0046872 metal ion binding
GO:0090729 toxin activity
Biological Process
GO:0008150 biological_process
GO:0035821 modulation of process of another organism
Cellular Component
GO:0005575 cellular_component
GO:0005773 vacuole
GO:0033095 aleurone grain

View graph for
Molecular Function

View graph for
Biological Process

View graph for
Cellular Component
External links
PDB RCSB:3rs6, PDBe:3rs6, PDBj:3rs6
PDBsum3rs6
PubMed22198239
UniProtP58907|LECA_DIOVI Lectin alpha chain

[Back to BioLiP]