Structure of PDB 3qqv Chain A

Receptor sequence
>3qqvA (length=357) Species: 1718 (Corynebacterium glutamicum) [Search protein sequence]
LDLDKFPEVVRDRLTQFLDAQELTIADIGAPVTDAVAHLRSFVLNGGKRI
RPLYAWAGFLAAQGHKNSSEKLESVLDAAASLEFIQACALIHDDIIDSSD
TRRGAPTVHRAVEADHRANNFEGDPEHFGVSVSILAGDMALVWAEDMLQD
SGLSAEALARTRDAWRGMRTEVIGGQLLDIYLESHANESVELADSVNRFK
TAAYTIARPLHLGASIAGGSPQLIDALLHYGHDIGIAFQLRDDLLGVFGD
PAITGKPAGDDIREGKRTVLLALALQRADKQSPEAATAIRAGVGKVTSPE
DIAVITEHIRATGAEEEVEQRISQLTESGLAHLDDVDIPDEVRAQLRALA
IRSTERR
3D structure
PDB3qqv Prediction of function for the polyprenyl transferase subgroup in the isoprenoid synthase superfamily.
ChainA
Resolution2.0 Å
3D
structure
Catalytic site residues are labeled in the structure
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Enzymatic activity
Catalytic site (original residue number in PDB) K63 C103 D108 D112 R117 D194 K215 F253 D257 D258
Catalytic site (residue number reindexed from 1) K48 C88 D93 D97 R102 D179 K200 F238 D242 D243
Enzyme Commision number 2.5.1.1: dimethylallyltranstransferase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 MG A D108 D112 D93 D97
BS02 MG A D108 D112 D93 D97
BS03 DMA A G62 K63 R66 Q101 R118 Q254 G47 K48 R51 Q86 R103 Q239
BS04 DMA A D108 R117 Q191 K215 K271 K281 D93 R102 Q176 K200 K256 K266
Gene Ontology
Molecular Function
GO:0004161 dimethylallyltranstransferase activity
GO:0004659 prenyltransferase activity
GO:0016740 transferase activity
GO:0046872 metal ion binding
Biological Process
GO:0008299 isoprenoid biosynthetic process

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Molecular Function
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Biological Process
External links
PDB RCSB:3qqv, PDBe:3qqv, PDBj:3qqv
PDBsum3qqv
PubMed23493556
UniProtQ8NNM1

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