Structure of PDB 3qo6 Chain A

Receptor sequence
>3qo6A (length=326) Species: 3702 (Arabidopsis thaliana) [Search protein sequence]
PKKLQTDELATVRLFQENTPSVVYITNLAVRQDAFTLDVLEVPQGSGSGF
VWDKQGHIVTNYHVIRGASDLRVTLADQTTFDAKVVGFDQDKDVAVLRID
APKNKLRPIPVGVSADLLVGQKVFAIGNPFGLDHTLTTGVISGLRREISS
AATGRPIQDVIQTDAAINPGNSGGPLLDSSGTLIGINTAIYSPSGASSGV
GFSIPVDTVGGIVDQLVRFGKVTRPILGIKFAPDQSVEQLGVSGVLVLDA
PPSGPAGKAGLQSTKRDGYGRLVLGDIITSVNGTKVSNGSDLYRILDQCK
VGDEVTVEVLRGDHKEKISVTLEPKP
3D structure
PDB3qo6 Structural adaptation of the plant protease Deg1 to repair photosystem II during light exposure.
ChainA
Resolution2.5 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 3.4.21.-
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide A H173 N278 S282 A299 I300 Y301 S302 P303 H63 N168 S172 A189 I190 Y191 S192 P193
BS02 peptide A I336 L337 I339 F341 Y403 I226 L227 I229 F231 Y293
Gene Ontology
Molecular Function
GO:0004252 serine-type endopeptidase activity
Biological Process
GO:0006508 proteolysis

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Molecular Function
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Biological Process
External links
PDB RCSB:3qo6, PDBe:3qo6, PDBj:3qo6
PDBsum3qo6
PubMed21532594
UniProtO22609|DEGP1_ARATH Protease Do-like 1, chloroplastic (Gene Name=DEGP1)

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