Structure of PDB 3qiw Chain A

Receptor sequence
>3qiwA (length=179) Species: 10090 (Mus musculus) [Search protein sequence]
EEHTIIQAEFYLLPDKRGEFMFDFDGDEIFHVDIEKSETIWRLEEFAKFA
SFEAQGALANIAVDKANLDVMKERSNNTPDANVAPEVTVLSRSPVNLGEP
NILICFIDKFSPPVVNVTWLRNGRPVTEGVSETVFLPRDDHLFRKFHYLT
FLPSTDDFYDCEVDHWGLEEPLRKHWEFE
3D structure
PDB3qiw Structural basis of specificity and cross-reactivity in T cell receptors specific for cytochrome c-I-E(k).
ChainA
Resolution3.3 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide A Q9 A52 S53 F54 G58 N62 V65 D66 N69 M73 Q7 A50 S51 F52 G56 N60 V63 D64 N67 M71
Gene Ontology
Biological Process
GO:0006955 immune response
GO:0019882 antigen processing and presentation
Cellular Component
GO:0016020 membrane
GO:0042613 MHC class II protein complex

View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:3qiw, PDBe:3qiw, PDBj:3qiw
PDBsum3qiw
PubMed21490152
UniProtP04224|HA22_MOUSE H-2 class II histocompatibility antigen, E-K alpha chain

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