Structure of PDB 3pab Chain A

Receptor sequence
>3pabA (length=279) Species: 10090 (Mus musculus) [Search protein sequence]
MGPHSLRYFVTAVSRPGLGEPRYMEVGYVDDTEFVRFDSDAENPRYEPRA
RWMEQEGPEYWERETQKAKGNEQSFRVDLRTLLGYYNQSKGGSHTIQVIS
GCEVGSDGRLLRGYQQYAYDGCDYIALNEDLKTWTAADMAALITKHKWEQ
AGEAERLRAYLEGTCVEWLRRYLKNGNATLLRTDSPKAHVTHHSRPEDKV
TLRCWALGFYPADITLTWQLNGEELIQDMELVETRPAGDGTFQKWASVVV
PLGKEQYYTCHVYHQGLPEPLTLRWEPPP
3D structure
PDB3pab Affinity thresholds for naive CD8+ CTL activation by peptides and engineered influenza A viruses
ChainA
Resolution2.2 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide A Y7 E24 Y59 E63 K66 N70 S73 F74 D77 Y84 Q114 Y116 T143 K146 W147 R155 L156 Y159 W167 Y8 E25 Y60 E64 K67 N71 S74 F75 D78 Y85 Q115 Y117 T144 K147 W148 R156 L157 Y160 W168
External links
PDB RCSB:3pab, PDBe:3pab, PDBj:3pab
PDBsum3pab
PubMed22039305
UniProtP01901|HA1B_MOUSE H-2 class I histocompatibility antigen, K-B alpha chain (Gene Name=H2-K1)

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