Structure of PDB 3p41 Chain A

Receptor sequence
>3p41A (length=283) Species: 220664 (Pseudomonas protegens Pf-5) [Search protein sequence]
HHHSLTAYQASSQARVDAAMHTLFTAPSPELARLYEAMRYSVMNGGKRVR
PLLAYAACEALGGKPEQANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQ
PTTHKAFDEACAILAGDGLQSLAFSALLDPALSDASAEIRLRMVTTLAQA
AGPAGMVGGQAIDLGSVGLKLDQQALEYMHRHKTGALIEASVILGALASG
RAEKGELKALQTYAQAIGLAFQVQDDILDVESDTATPTYPALLGLAAAKE
YALELRDQALHALRPFDAAAEPLRELARYIVER
3D structure
PDB3p41 Prediction of function for the polyprenyl transferase subgroup in the isoprenoid synthase superfamily.
ChainA
Resolution1.76 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 2.5.1.10: (2E,6E)-farnesyl diphosphate synthase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 MG A D83 D89 D86 D92
BS02 MG A D83 D89 D86 D92
BS03 DMA A K44 R45 V46 R47 H76 R95 I185 F218 K47 R48 V49 R50 H79 R98 I188 F221
BS04 DMA A S79 D83 R94 M153 Q157 K180 S82 D86 R97 M156 Q160 K183
BS05 POP A D160 H177 K180 D163 H180 K183
Gene Ontology
Molecular Function
GO:0004337 geranyltranstransferase activity
GO:0004659 prenyltransferase activity
GO:0016740 transferase activity
GO:0046872 metal ion binding
Biological Process
GO:0008299 isoprenoid biosynthetic process
Cellular Component
GO:0005737 cytoplasm

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Molecular Function
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Cellular Component
External links
PDB RCSB:3p41, PDBe:3p41, PDBj:3p41
PDBsum3p41
PubMed23493556
UniProtQ4K5A6

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