Structure of PDB 3o9w Chain A

Receptor sequence
>3o9wA (length=274) Species: 10090 (Mus musculus) [Search protein sequence]
KNYTFRCLQMSSFANRSWSRTDSVVWLGDLQTHRWSNDSATISFTKPWSQ
GKLSNQQWEKLQHMFQVYRVSFTRDIQELVKMMSPKEDYPIEIQLSAGCE
MYPGNASESFLHVAFQGKYVVRFWGTSWQTVPGAPSWLDLPIKVLNADQG
TSATVQMLLNDTCPLFVRGLLEAGKSDLEKQEKPVAWLSSVPSSAHGHRQ
LVCHVSGFYPKPVWVMWMRGDQEQQGTHRGDFLPNADETWYLQATLDVEA
GEEAGLACRVKHSSLGGQDIILYW
3D structure
PDB3o9w The V alpha 14 invariant natural killer T cell TCR forces microbial glycolipids and CD1d into a conserved binding mode.
ChainA
Resolution2.8 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 FUC A S114 G130 N165 S109 G125 N160
BS02 1O2 A S28 F70 Y73 F77 D80 V118 W133 L143 D153 G155 T156 L163 S23 F65 Y68 F72 D75 V113 W128 L138 D148 G150 T151 L158
External links
PDB RCSB:3o9w, PDBe:3o9w, PDBj:3o9w
PDBsum3o9w
PubMed20921281
UniProtP11609|CD1D1_MOUSE Antigen-presenting glycoprotein CD1d1 (Gene Name=Cd1d1)

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