Structure of PDB 3nyr Chain A

Receptor sequence
>3nyrA (length=460) Species: 1902 (Streptomyces coelicolor) [Search protein sequence]
LFPALSPAPTGAPADRPALRFGERSLTYAELAAAAGATAGRIGRVAVWAT
PAMETGVAVVAALLAGVAAVPLNPKSGDKELAHILSDSAPSLVLAPPDAE
LPPALGALERVDVDVRARGAVPEDGADDGDPALVVYTSGTTGPPKGAVIP
RRALATTLDALADAWQWTGEDVLVQGLPLFHVHGLVLGILGPLRRGGSVR
HLGRFSTEGAARELNDGATMLFGVPTMYHRIAETLPADPELAKALAGARL
LVSGSAALPVHDHERIAAATGRRVIERYGMTETLMNTSVRADGEPRAGTV
GVPLPGVELRLVPIAALDGESVGEIQVRGPNLFTEYLNRPDATAAAFTED
GFFRTGDMAVRDPDGYVRIVGRKATDLIKSGGYKIGAGEIENALLEHPEV
REAAVTGEPDPDLGERIVAWIVPADPAAPPALGTLADHVAARLAPHKRPR
VVRYLDAVPR
3D structure
PDB3nyr Enzymatic Extender Unit Generation for In Vitro Polyketide Synthase Reactions: Structural and Functional Showcasing of Streptomyces coelicolor MatB.
ChainA
Resolution1.45 Å
3D
structure
Catalytic site residues are labeled in the structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Catalytic site (original residue number in PDB) T143 T163 H187 T287 E288 K390 K395
Catalytic site (residue number reindexed from 1) T137 T157 H181 T281 E282 K379 K384
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 MLC A P184 H187 T232 R236 S261 R283 G285 G392 G393 Y394 P178 H181 T226 R230 S255 R277 G279 G381 G382 Y383
BS02 AMP A S261 A262 A263 R283 Y284 G285 M286 T287 D368 K390 K395 S255 A256 A257 R277 Y278 G279 M280 T281 D357 K379 K384
Gene Ontology
Molecular Function
GO:0000166 nucleotide binding
GO:0003824 catalytic activity

View graph for
Molecular Function
External links
PDB RCSB:3nyr, PDBe:3nyr, PDBj:3nyr
PDBsum3nyr
PubMed21338915
UniProtQ9L0A2

[Back to BioLiP]