Structure of PDB 3ndz Chain A

Receptor sequence
>3ndzA (length=345) Species: 1493 (Clostridium cellulovorans) [Search protein sequence]
STAFTGVRDVPAQQIVNEMKVGWNLGNTMDAIGGETNWGNPMTTHAMINK
IKEAGFNTLRLPVTWDGHMGAAPEYTIDQTWMKRVEEIANYAFDNDMYVI
INLHHENEWLKPFYANEAQVKAQLTKVWTQIANNFKKYGDHLIFETMNEP
RPVGASLQWTGGSYENREVVNRYNLTAVNAIRATGGNNATRYIMVPTLAA
SAMSTTINDLVIPNNDSKVIVSLHMYSPYFFAMDINGTSSWGSDYDKSSL
DSEFDAVYNKFVKNGRAVVIGEMGSINKNNTAARVTHAEYYAKSAKARGL
TPIWWDNGYSVAGKAETFGIFNRSNLTWDAPEVMKAFIKGIGGSS
3D structure
PDB3ndz The structure of the catalytic and carbohydrate binding domain of endoglucanase D bound to cellotriose
ChainA
Resolution2.08 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 3.2.1.4: cellulase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 BGC A H107 H108 E152 E275 W308 E319 H104 H105 E149 E272 W305 E316
BS02 BGC A N30 W41 H108 N310 E319 N27 W38 H105 N307 E316
BS03 BGC A A205 M206 A259 A202 M203 A256
Gene Ontology
Molecular Function
GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds
Biological Process
GO:0000272 polysaccharide catabolic process
GO:0005975 carbohydrate metabolic process

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Molecular Function
View graph for
Biological Process
External links
PDB RCSB:3ndz, PDBe:3ndz, PDBj:3ndz
PDBsum3ndz
PubMed
UniProtP28623|GUND_CLOC7 Endoglucanase D (Gene Name=engD)

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