Structure of PDB 3n9m Chain A

Receptor sequence
>3n9mA (length=503) Species: 6239 (Caenorhabditis elegans) [Search protein sequence]
KESDRCGGCGKFTHEDDLIKPLMSKKKSHHHKKNDFQWIGCDSCQTWYHF
LCSGLEQFEYYLYEKFFCPKCVPHTGHSIRYKVVAPHRYRWYSPNEKHLG
IEVGSKTWIEDFITRENTVPSPTDDEVCIVEDGYEFRREFEKLGGADNWG
KVFMVKDMDGLNMTMPKPGFDLEDVVKIMGSDYEVDTIDVYNQSTYSMKL
DTFRKLFRDTKNRPLLYNFLSLEFSDNNEMKEIAKPPRFVQEISMVNRLW
PDVSGAEYIKLLQREEYLPEDQRPKVEQFCLAGMAGSYTDFHVDFGGSSV
YYHILKGEKIFYIAAPTEQNFAAYQAHETSPDTTTWFGDIANGAVKRVVI
KEGQTLLIPAGWIHAVLTPVDSLVFGGNFLHLGNLEMQMRVYHLENAIRK
EIRSEEKFYFPNFELLHWMYMRNVLLEKITEANQEGSDMREQEKNIWTAS
QIMKAEMERWMDRELRLGPEKNAILPTDDKNKIMISVRKQIEIQTKIQNA
KNK
3D structure
PDB3n9m Structural insights into a dual-specificity histone demethylase ceKDM7A from Caenorhabditis elegans
ChainA
Resolution2.493 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 1.14.11.-
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 FE2 A H495 D497 H567 H292 D294 H364
BS02 ZN A C198 C201 H252 C255 C6 C9 H49 C52
BS03 ZN A C244 C247 C274 C41 C44 C71
External links
PDB RCSB:3n9m, PDBe:3n9m, PDBj:3n9m
PDBsum3n9m
PubMed20567261
UniProtQ9GYI0|KDM7_CAEEL Lysine-specific demethylase 7 homolog (Gene Name=jmjd-1.2)

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