Structure of PDB 3mo4 Chain A

Receptor sequence
>3mo4A (length=455) Species: 391904 (Bifidobacterium longum subsp. infantis ATCC 15697 = JCM 1222 = DSM 20088) [Search protein sequence]
AGINLNYLANVRPSSRQLAWQRMEMYAFLHFGMNTMTDREWGLGHEDPAL
FNPRNVDVDQWMDALVAGGMAGVILTCKHHDGFCLWPSRLTRHTVASSPW
REGKGDLVREVSESARRHGLKFGVYLSPWDRTEESYGKGKAYDDFYVGQL
TELLTQYGPIFSVWLDGANGEGKNGKTQYYDWDRYYNVIRSLQPDAVISV
CGPDVRWAGNEAGHVRDNEWSVVPRRLRSATVSSQDDDLGSREAVAGYGD
NVCWYPAEVDTSIRPGWFYHQSEDDKVMSADQLFDLWLSAVGGNSSLLLN
IPPSPEGLLAEPDVQSLKGLGRRVSEFREALASVRCEARTSSASAAAAHL
VDGNRDTFWRPDADDAAPAITLTLPQPTTINAIVIEEAIEHGQRIEHLRV
TGALPDGTERVLGQAGTVGYRRILRFDDVEVSSVTLHVDGSRLAPMISRA
AAVRI
3D structure
PDB3mo4 Bifidobacterium longum subsp. infantis ATCC 15697 alpha-fucosidases are active on fucosylated human milk oligosaccharides.
ChainA
Resolution1.901 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 TYR A H36 H85 D172 H30 H79 D166
Gene Ontology
Molecular Function
GO:0004560 alpha-L-fucosidase activity
GO:0016787 hydrolase activity
Biological Process
GO:0005975 carbohydrate metabolic process
GO:0006004 fucose metabolic process
GO:0016139 glycoside catabolic process
Cellular Component
GO:0005764 lysosome

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Molecular Function

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Biological Process

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Cellular Component
External links
PDB RCSB:3mo4, PDBe:3mo4, PDBj:3mo4
PDBsum3mo4
PubMed22138995
UniProtB7GNN8

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