Structure of PDB 3m8z Chain A

Receptor sequence
>3m8zA (length=391) Species: 226900 (Bacillus cereus ATCC 14579) [Search protein sequence]
NKYKRIFLVVMDSVGIGEAPDAEQFGDLGSDTIGHIAEHMNGLQMPNMVK
LGLGNIREMKGISKVEKPLGYYTKMQEKSTGKDTMTGHWEIMGLYIDTPF
QVFPEGFPKELLDELEEKTGRKIIGNKPASGTEILDELGQEQMETGSLIV
YTSADSVLQIAAHEEVVPLDELYKICKIARELTLDEKYMVGRVIARPFVG
EPGNFTRTPNRHDYALKPFGRTVMNELKDSDYDVIAIGKISDIYDGEGVT
ESLRTKSNMDGMDKLVDTLNMDFTGLSFLNLVDFDALFGHRRDPQGYGEA
LQEYDARLPEVFAKLKEDDLLLITADHGNDPIHPGTDHTREYVPLLAYSP
SMKEGGQELPLRQTFADIGATVAENFGVKMPEYGTSFLNEL
3D structure
PDB3m8z Bacillus cereus Phosphopentomutase Is an Alkaline Phosphatase Family Member That Exhibits an Altered Entry Point into the Catalytic Cycle.
ChainA
Resolution1.8 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 5.4.2.7: phosphopentomutase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 MN A T85 D156 D286 H291 H339 T84 D155 D285 H290 H338
BS02 MN A D13 T85 D327 H328 D12 T84 D326 H327
BS03 MN A G27 D28 H334 G26 D27 H333
BS04 HSX A S131 G132 Y152 S154 Q160 R193 R197 R208 S130 G131 Y151 S153 Q159 R192 R196 R207
BS05 HSX A T85 D156 R193 V283 D286 A287 H339 T84 D155 R192 V282 D285 A286 H338
Gene Ontology
Molecular Function
GO:0000287 magnesium ion binding
GO:0003824 catalytic activity
GO:0008973 phosphopentomutase activity
GO:0016853 isomerase activity
GO:0030145 manganese ion binding
GO:0046872 metal ion binding
Biological Process
GO:0006015 5-phosphoribose 1-diphosphate biosynthetic process
GO:0006018 2-deoxyribose 1-phosphate catabolic process
GO:0009117 nucleotide metabolic process
GO:0043094 cellular metabolic compound salvage
Cellular Component
GO:0005737 cytoplasm
GO:0005829 cytosol

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:3m8z, PDBe:3m8z, PDBj:3m8z
PDBsum3m8z
PubMed21193409
UniProtQ818Z9|DEOB_BACCR Phosphopentomutase (Gene Name=deoB)

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