Structure of PDB 3lnf Chain A

Receptor sequence
>3lnfA (length=211) Species: 10090 (Mus musculus) [Search protein sequence]
VIPPISCPENEEGEFPKNLVQIKSNRDKETKVFYSITGQGADKPPVGVFI
IERETGWLKVTQPLDREAIAKYILYSHAVSSNGEAVEDPMEIVITVTDQN
DNRPEFTQEVFEGSVAEGAVPGTSVMKVSATDADDDVNTYNAAIAYTIVS
QDPELPHKNMFTVNRDTGVISVLTSGLDRESYPTYTLVVQAADLQGEGLS
TTAKAVITVKD
3D structure
PDB3lnf Two-step adhesive binding by classical cadherins.
ChainA
Resolution2.5 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 CA A E11 D67 E69 D103 E9 D65 E67 D101
BS02 CA A E11 E69 D100 Q101 D103 D136 E9 E67 D98 Q99 D101 D134
BS03 CA A N102 N104 D134 D136 N143 D195 N100 N102 D132 D134 N141 D193
Gene Ontology
Molecular Function
GO:0005509 calcium ion binding
Biological Process
GO:0007155 cell adhesion
GO:0007156 homophilic cell adhesion via plasma membrane adhesion molecules
GO:0098609 cell-cell adhesion
Cellular Component
GO:0005886 plasma membrane
GO:0016020 membrane

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:3lnf, PDBe:3lnf, PDBj:3lnf
PDBsum3lnf
PubMed20190754
UniProtP09803|CADH1_MOUSE Cadherin-1 (Gene Name=Cdh1)

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