Structure of PDB 3lmw Chain A

Receptor sequence
>3lmwA (length=472) [Search protein sequence]
VSPKTYKDADFYVAPTQQDVNYDLVDDFGANGNDTSDDSNALQRAINAIS
RKPNGGTLLIPNGTYHFLGIQMKSNVHIRVESDVIIKPTWNGDGKNHRLF
EVGVNNIVRNFSFQGLGNGFLVDFKDSRDKNLAVFKLGDVRNYKISNFTI
DDNKTIFASILVDVTERNGRLHWSRNGIIERIKQNNALFGYGLIQTYGAD
NILFRNLHSEGGIALRMETDNLLMKNYKQGGIRNIFADNIRCSKGLAAVM
FGPHFMKNGDVQVTNVSSVSCGSAVRSDSGFVELFSPTDEVHTRQSWKQA
VESKLGRGCAQTPYARGNGGTRWAARVTQKDACLDKAKLEYGIEPGSFGT
VKVFDVTARFGYNADLKQDQLDYFSTSNPMCKRVCLPTKEQWSKQGQIYI
GPSLAAVIDTTPETSKYDYDVKTFNVKRINFPVNSHKTIDTNTESSRVCN
YYGMSECSSSRWERLEHHHHHH
3D structure
PDB3lmw Identification of catalytic residues and mechanistic analysis of family GH82 iota-carrageenases
ChainA
Resolution2.6 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 3.2.1.157: iota-carrageenase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 CA A N58 S63 D65 N31 S36 D38
Gene Ontology
Molecular Function
GO:0016798 hydrolase activity, acting on glycosyl bonds
GO:0033952 iota-carrageenase activity
Biological Process
GO:0000272 polysaccharide catabolic process
GO:0071555 cell wall organization
Cellular Component
GO:0005576 extracellular region

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:3lmw, PDBe:3lmw, PDBj:3lmw
PDBsum3lmw
PubMed20681629
UniProtQ9F5I8|CGIA_ALTMA Iota-carrageenase (Gene Name=cgiA)

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