Structure of PDB 3l87 Chain A

Receptor sequence
>3l87A (length=200) Species: 210007 (Streptococcus mutans UA159) [Search protein sequence]
MSAIKTITKASHLIDMNDIIREGHPTLRAVAQDVTFPLNEDDIILGEKML
QFLKNSQDPVTAEKMELRGGVGLAAPQLDISKRIIAVLIPNPEDPPKEAY
ALKEVMYNPRIIAHSVQDAALADGEGCLSVDRVVEGYVIRHSRVTIEYYD
KNSDKKKLKLKGYQSIVVQHEIDHTNGIMFFDRINEKNPFEIKEGLLLIE
3D structure
PDB3l87 The Crystal Structure of smu.143c from Streptococcus mutans UA159
ChainA
Resolution2.0 Å
3D
structure
Catalytic site residues are labeled in the structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Catalytic site (original residue number in PDB) G72 Q77 C131 L132 H174 E175 H178
Catalytic site (residue number reindexed from 1) G72 Q77 C127 L128 H170 E171 H174
Enzyme Commision number 3.5.1.88: peptide deformylase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 FE A Q77 A131 H174 H178 Q77 A127 H170 H174
Gene Ontology
Molecular Function
GO:0016787 hydrolase activity
GO:0042586 peptide deformylase activity
GO:0046872 metal ion binding
Biological Process
GO:0006412 translation
GO:0018206 peptidyl-methionine modification

View graph for
Molecular Function
View graph for
Biological Process
External links
PDB RCSB:3l87, PDBe:3l87, PDBj:3l87
PDBsum3l87
PubMed
UniProtQ8DWC2|DEF_STRMU Peptide deformylase (Gene Name=def)

[Back to BioLiP]