Structure of PDB 3k6b Chain A

Receptor sequence
>3k6bA (length=217) Species: 6239 (Caenorhabditis elegans) [Search protein sequence]
SQDPYFKIANWTNEHDDFKKAEMRMDEKHRKKVDKVMKEWGDLETRYNEQ
KAKDPKGAEKFKSQMNARFQKTVSSLEEEHKRMRKEIEAVHEERVQAMLN
EKKRDATHDYRQALATHVNKPNKHSVLQSLKAYIRAEEKDRMHTLNRYRH
LLKADSKEAAAYKPTVIHRLRYIDLRINGTLAMLRDFPDLEKYVRPIAVT
YWKDYRDEVSPDISVED
3D structure
PDB3k6b Structural characterization of the E2 domain of APL-1, a Caenorhabditis elegans homolog of human amyloid precursor protein, and its heparin binding site
ChainA
Resolution2.8 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 GU4 A N246 E247 H248 M375 H376 D450 N13 E14 H15 M142 H143 D217
Gene Ontology

View graph for
Cellular Component
External links
PDB RCSB:3k6b, PDBe:3k6b, PDBj:3k6b
PDBsum3k6b
PubMed19906646
UniProtQ10651|A4_CAEEL Amyloid-beta-like protein (Gene Name=apl-1)

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