Structure of PDB 3jbx Chain A

Receptor sequence
>3jbxA (length=550) Species: 7955 (Danio rerio) [Search protein sequence]
GLHPAVCLAIRVNTFLSCSQYHKMYRTVKATSGRQIFQPLHTLRNAEKEL
LPGFHQFEWQPALKNVSTSWDVGIIDGLSGWTVSVDDVPADTISRRFRYD
VALVSALKDLEEDIMEGLRERALDDSMCTSGFTVVVKESCDGMGDVSEKH
GSGPAVPEKAVRFSFTIMSISIRLEGEDDGITIFQEQKPNSELSCRPLCL
MFVDESDHETLTAILGPVVAERKAMMESRLIISVGGLLRSFRFFFRGTGY
DEKMVREMEGLEASGSTYICTLCDSTRAEASQNMVLHSITRSHDENLERY
EIWRKNPFSESADELRDRVKGVSAKPFMETQPTLDALHCDIGNATEFYKI
FQDEIGEVYQKPNPSREERRRWRSTLDKQLRKKMKLKPVMRMNGNYARRL
MTREAVEAVCELVPSEERREALLKLMDLYLQMKPVWRSTCPSRDCPDQLC
QYSYNSQQFADLLSSMFKYRYDGKITNYLHKTLAHVPEIVERDGSIGAWA
SEGNESGNKLFRRFRKMNARQSKTFELEDILKHHWLYTSKYLQKFMEAHK
3D structure
PDB3jbx Molecular Mechanism of V(D)J Recombination from Synaptic RAG1-RAG2 Complex Structures.
ChainA
Resolution3.4 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number 2.3.2.27: RING-type E3 ubiquitin transferase.
3.1.-.-
Interaction with ligand
Gene Ontology
Molecular Function
GO:0004519 endonuclease activity
GO:0043565 sequence-specific DNA binding
GO:0046872 metal ion binding
GO:0061630 ubiquitin protein ligase activity
Biological Process
GO:0033151 V(D)J recombination

View graph for
Molecular Function
View graph for
Biological Process
External links
PDB RCSB:3jbx, PDBe:3jbx, PDBj:3jbx
PDBsum3jbx
PubMed26548953
UniProtO13033|RAG1_DANRE V(D)J recombination-activating protein 1 (Gene Name=rag1)

[Back to BioLiP]