Structure of PDB 3ivk Chain A

Receptor sequence

>3ivkA (length=224) Species: 10090 (Mus musculus) [Search protein sequence]

SEVQLVESGGGLVQPGGSLRLSCAASGFYISYSSIHWVRQAPGKGLEWVA
SISPYSGSTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARQ
GYRRRSGRGFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGC
LVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLG
TQTYICNVNHKPSNTKVDKKVEPK

3D structure

PDB

3ivk Crystal structure of the catalytic core of an RNA-polymerase ribozyme.

Chain

Resolution

3.1 Å

3D
structure

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Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	rna	A	Y34 Y57 S58 S60 Q102 Y104 R105 R106 R110	Y32 Y55 S56 S58 Q100 Y102 R103 R104 R108

External links

PDB	RCSB:3ivk, PDBe:3ivk, PDBj:3ivk
PDBsum	3ivk
PubMed	19965478

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