Structure of PDB 3ikc Chain A

Receptor sequence
>3ikcA (length=217) Species: 10090 (Mus musculus) [Search protein sequence]
IVMTQSPSSLAVSAGEKVTMSCKSSQSLLNSRTRKNYLAWYQQKPGQSPK
LLIYWASTRESGVPDRFTGSGSGTDFTLTISSVQAEDLAVYYCKQSNNLR
TFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINV
KWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEA
THKTSTSPIVKSFNRNE
3D structure
PDB3ikc The role of CDR H3 in antibody recognition of a synthetic analog of a lipopolysaccharide antigen.
ChainA
Resolution2.6 Å
3D
structure
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Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 KDO A Y32 S91 N92 R95 Y37 S96 N97 R100 PDBbind-CN: -logKd/Ki=7.46,Kd=0.035uM
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