Structure of PDB 3ik5 Chain A

Receptor sequence
>3ik5A (length=119) Species: 388909 (Simian immunodeficiency virus - cpz) [Search protein sequence]
VSVRPKVPLRTMSYKLAIDMSHFIKEKGGLEGIYYSARRHRILDIYLEKE
EGIIPDWQDYTSGPGIRYPKTFGWLWKLVPVPAQTSQWDDPWGEVLAWKF
DPTLAYTYEAYVRYPEEFG
3D structure
PDB3ik5 Pseudo-merohedral twinning and noncrystallographic symmetry in orthorhombic crystals of SIVmac239 Nef core domain bound to different-length TCRzeta fragments.
ChainA
Resolution2.05 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide A R103 G128 I132 R137 R138 I141 Y145 E149 R4 G29 I33 R38 R39 I42 Y46 E50
Gene Ontology

View graph for
Molecular Function
External links
PDB RCSB:3ik5, PDBe:3ik5, PDBj:3ik5
PDBsum3ik5
PubMed20124696
UniProtP31818|NEF_SIVMA Protein Nef (Gene Name=nef)

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