Structure of PDB 3i8b Chain A

Receptor sequence
>3i8bA (length=506) Species: 367928 (Bifidobacterium adolescentis ATCC 15703) [Search protein sequence]
SLRTLVAGVDTSTQSCKVRVTDAETGELVRFGQAKHPNGTSVDPSYWWSA
FQEAAEQAGGLDDVSALAVGGQQHGMVILDNQGNVIRDAMLWNDTSSAPQ
AAALIEKLGAAPAQDGEPEDPIARGKQRWVKAVGSSPVASYTLTKVAWVA
ENEPENVKKIAAICLPHDWLSWRIAGYGPVAEGEDAHLEALFTDRSDASG
TIYYDAASNEYRRDLIAMVLEAAEGAKAAQSHAEAIVLPTVLGPRDAAPV
KADPAIAGKNVEGGCLLAPGGGDNAMASLGLGMAVGDVSISLGTSGVAAA
ISENPTYDLTGAVSGFADCTGHYLPLACTINGSRILDAGRAALGVDYDEL
AKLAFASKPGANGITLVPYFDGERTPNRPNATATFSGMTLANTTRENLAR
AFVEGLLCSQRDCLELIRSLGASITRILLIGGGAKSEAIRTLAPSILGMD
VTRPATDEYVAIGAARQAAWVLSGETEPPAWQLTIDGVETGEPTEAVYEA
YAKARG
3D structure
PDB3i8b The crystal structure of xylulose kinase from Bifidobacterium adolescentis
ChainA
Resolution2.0 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 2.7.1.17: xylulokinase.
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 MG A E189 L191 T240 E189 L191 T240
Gene Ontology
Molecular Function
GO:0004856 D-xylulokinase activity
GO:0005524 ATP binding
GO:0016301 kinase activity
GO:0016773 phosphotransferase activity, alcohol group as acceptor
GO:0046872 metal ion binding
Biological Process
GO:0005975 carbohydrate metabolic process
GO:0005997 xylulose metabolic process
GO:0005998 xylulose catabolic process
GO:0016310 phosphorylation
GO:0042732 D-xylose metabolic process
GO:0046835 carbohydrate phosphorylation

View graph for
Molecular Function

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Biological Process
External links
PDB RCSB:3i8b, PDBe:3i8b, PDBj:3i8b
PDBsum3i8b
PubMed
UniProtA1A0I0

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