Structure of PDB 3hyo Chain A

Receptor sequence
>3hyoA (length=273) Species: 1590 (Lactiplantibacillus plantarum) [Search protein sequence]
LSTMLVAEDLSAVGGISLSSALPVLTAMQYDVAALPTSLLSTHTSGYGTP
AVVDLSTWLPQVFAHWTRAQLHFDQALIGYVGSVALCQQITTYLEQQTLS
LLVVDPVLGDLGQLYQGFDQDYVAAMRQLIQQADVILPNTTEAALLTGAP
YQVTPDLEVILPALQAQLKTGAHAVITDVQRADQIGCAWLDEAGHVQYCG
ARRLPGHYNGTGDTLAAVIAGLLGRGYPLAPTLARANQWLNMAVAETIAQ
NRTDDRQGVALGDLLQAILALNE
3D structure
PDB3hyo Crystal structure of pyridoxal kinase from Lactobacillus plantarum in complex with ADP
ChainA
Resolution1.85 Å
3D
structure
Catalytic site residues are labeled in the structure
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Enzymatic activity
Catalytic site (original residue number in PDB) D178 G210
Catalytic site (residue number reindexed from 1) D178 G210
Enzyme Commision number 2.7.1.35: pyridoxal kinase.
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 ADP A T177 I185 L204 T211 G212 L240 T177 I185 L204 T211 G212 L240
Gene Ontology
Molecular Function
GO:0005524 ATP binding
GO:0008478 pyridoxal kinase activity
GO:0016301 kinase activity
Biological Process
GO:0009443 pyridoxal 5'-phosphate salvage
GO:0016310 phosphorylation
GO:0042816 vitamin B6 metabolic process
Cellular Component
GO:0005829 cytosol

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Molecular Function

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Biological Process

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Cellular Component
External links
PDB RCSB:3hyo, PDBe:3hyo, PDBj:3hyo
PDBsum3hyo
PubMed
UniProtF9UM74

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