Structure of PDB 3he7 Chain A

Receptor sequence
>3he7A (length=281) Species: 10090 (Mus musculus) [Search protein sequence]
YTFRCLQMSSFANRSWSRTDSVVWLGDLQTHRWSNDSATISFTKPWSQGK
LSNQQWEKLQHMFQVYRVSFTRDIQELVKMPIEIQLSAGCEMYASESFLH
VAFQGKYVVRFWGTSWQTVPGAPSWLDLPIKVLNADQGTSATVQMLLNDT
CPLFVRGLLEAGKSDLEKQEKPVAWLSSVPSSAHGHRQLVCHVSGFYPKP
VWVMWMRGDQEQQGTHRGDFLPNADETWYLQATLDVEAGEEAGLACRVKH
SSLGGQDIILYWGLHHILDAQKMVWNHRHHH
3D structure
PDB3he7 Differential recognition of CD1d-alpha-galactosyl ceramide by the V beta 8.2 and V beta 7 semi-invariant NKT T cell receptors
ChainA
Resolution2.8 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 AGH A F70 Y73 S76 D80 L84 V118 W133 D153 T156 C168 F171 F63 Y66 S69 D73 L77 V101 W116 D136 T139 C151 F154
External links
PDB RCSB:3he7, PDBe:3he7, PDBj:3he7
PDBsum3he7
PubMed19592275
UniProtP11609|CD1D1_MOUSE Antigen-presenting glycoprotein CD1d1 (Gene Name=Cd1d1)

[Back to BioLiP]