Structure of PDB 3gmr Chain A

Receptor sequence
>3gmrA (length=273) Species: 10090 (Mus musculus) [Search protein sequence]
NYTFRCLQMSSFANRSWSRTDSVVWLGDLQTHRWSNDSATISFTKPWSQG
KLSNQQWEKLQHMFQVYRVSFTRDIQELVKMMSPKEDYPIEIQLSAGCEM
YPGNASESFLHVAFQGKYVVRFWGTSWQTVPGAPSWLDLPIKVLNADQGT
SATVQMLLNDTCPLFVRGLLEAGKSDLEKQEKPVAWLSSVPSSAHGHRQL
VCHVSGFYPKPVWVMWMRGDQEQQGTHRGDFLPNADETWYLQATLDVEAG
EEAGLACRVKHSSLGGQDIILYW
3D structure
PDB3gmr Structural evaluation of potent NKT cell agonists: implications for design of novel stimulatory ligands.
ChainA
Resolution1.9 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 MAN A W129 Q134 W123 Q128
BS02 FUC A S114 W129 G130 S108 W123 G124
BS03 C8P A C12 Q14 Y73 S76 D80 L84 L100 A102 F120 L150 D153 T156 C6 Q8 Y67 S70 D74 L78 L94 A96 F114 L144 D147 T150
External links
PDB RCSB:3gmr, PDBe:3gmr, PDBj:3gmr
PDBsum3gmr
PubMed19732779
UniProtP11609|CD1D1_MOUSE Antigen-presenting glycoprotein CD1d1 (Gene Name=Cd1d1)

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