Structure of PDB 3gk0 Chain A

Receptor sequence
>3gk0A (length=252) Species: 320372 (Burkholderia pseudomallei 1710b) [Search protein sequence]
FFLTTPAAIDLGVNIDHVATLRNARGTAYPDPVRAALAAEDAGADAITLH
LREDRRHIVDADVRTLRPRVKTRMNLECAVTPEMLDIACEIRPHDACLVP
EKRSELTTEGGLDVVGHFDAVRAACKQLADAGVRVSLFIDPDEAQIRAAH
ETGAPVIELHTGRYADAHDAAEQQREFERIATGVDAGIALGLKVNAGHGL
HYTNVQAIAALPGIAELNIGHAIVAHAVFVGWDNAVREMKAIMVAARVAA
LH
3D structure
PDB3gk0 Combining functional and structural genomics to sample the essential Burkholderia structome.
ChainA
Resolution2.28 Å
3D
structure
Catalytic site residues are labeled in the structure
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Enzymatic activity
Catalytic site (original residue number in PDB) N16 H19 H52 R54 R58 E79 T110 E160 H200
Catalytic site (residue number reindexed from 1) N14 H17 H50 R52 R56 E77 T108 E158 H198
Enzyme Commision number 2.6.99.2: pyridoxine 5'-phosphate synthase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 DXP A T29 Y31 T27 Y29
Gene Ontology
Molecular Function
GO:0016740 transferase activity
GO:0016769 transferase activity, transferring nitrogenous groups
GO:0033856 pyridoxine 5'-phosphate synthase activity
Biological Process
GO:0008615 pyridoxine biosynthetic process
Cellular Component
GO:0005737 cytoplasm
GO:0005829 cytosol

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:3gk0, PDBe:3gk0, PDBj:3gk0
PDBsum3gk0
PubMed23382856
UniProtQ3JQ80|PDXJ_BURP1 Pyridoxine 5'-phosphate synthase (Gene Name=pdxJ)

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