Structure of PDB 3g08 Chain A

Receptor sequence
>3g08A (length=262) Species: 10090 (Mus musculus) [Search protein sequence]
NYTFRCLQMSSFANRSWSRTDSVVWLGDLQTHRWSNDSATISFTKPWSQG
KLSNQQWEKLQHMFQVYRVSFTRDIQELVKMMEDYPIEIQLSAGCEMYAS
ESFLHVAFQGKYVVRFWGTSWQTVPGAPSWLDLPIKVLNADQGTSATVQM
LLNDTCPLFVRGLLEAGKSDLEKQEKPVAWLSSVPHRQLVCHVSGFYPKP
VWVMWMRGDQEQQGTHRGDFLPNADETWYLQATLDVEAGEEAGLACRVKH
SSLGGQDIILYW
3D structure
PDB3g08 Mechanisms for glycolipid antigen-driven cytokine polarization by Valpha14i NKT cells.
ChainA
Resolution1.6 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 FEE A F10 C12 F70 Y73 S76 D80 W133 D153 T156 C168 F171 F4 C6 F64 Y67 S70 D74 W121 D141 T144 C156 F159 MOAD: Kd=6.843nM
PDBbind-CN: -logKd/Ki=8.16,Kd=6.843nM
External links
PDB RCSB:3g08, PDBe:3g08, PDBj:3g08
PDBsum3g08
PubMed19949076
UniProtP11609|CD1D1_MOUSE Antigen-presenting glycoprotein CD1d1 (Gene Name=Cd1d1)

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