Structure of PDB 3fhd Chain A

Receptor sequence
>3fhdA (length=456) Species: 435895 (Human herpesvirus 8 type M) [Search protein sequence]
PADLFSEDYLVDTLDGLTVDDQQAVLASLSFSKFLKHAKVRDWCAQAKIQ
PSMPALRMAYNYFLFSKVGEFIGSEDVCNFFVDRVFGGVRLLDVASVYAA
CSQMNAHQRHHICCLVERATSSQSLNPVWDALRDGIISSSKFHWAVKQQN
TSKKIFSPGLRCEEVVKTLLATLLHPDETNCLDYGFMQSPQNGIFGVSLD
FAANVKTDTEGRLQFDPNCKVYEIKCRFKYTFAKMECDPIYAAYQRLYEA
PGKLALKDFFYSISKPAVEYVGLGKLPSESDYLVAYDQEWEACRKLTPLH
NLIRECILHNSTTESDVYVLTDPQDTRGQISIKARFKANLFVNVRHSYFY
QVLLQSSIVEEYIGLDSGIPRLGSPKYYIATGFFRKRGYQDPVNCTIGGD
ALDPHVEIPTLLIVTPVYFPRGAKHRLLHQAANFWSRSAKDTFPYIKWDF
SYLSAN
3D structure
PDB3fhd Crystal structure of the shutoff and exonuclease protein from the oncogenic Kaposi's sarcoma-associated herpesvirus
ChainA
Resolution1.85 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 MG A E184 D221 E244 I245 E163 D200 E223 I224
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0004519 endonuclease activity
GO:0004527 exonuclease activity
GO:0005515 protein binding
GO:0046872 metal ion binding
Cellular Component
GO:0030430 host cell cytoplasm
GO:0042025 host cell nucleus

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Molecular Function
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Cellular Component
External links
PDB RCSB:3fhd, PDBe:3fhd, PDBj:3fhd
PDBsum3fhd
PubMed19843164
UniProtP88925

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