Structure of PDB 3ebl Chain A

Receptor sequence
>3eblA (length=323) Species: 39947 (Oryza sativa Japonica Group) [Search protein sequence]
VVPLHTWVLISNFKLSYNILRRADGTFERDLGEYLDRRVPANARPLEGVS
SFDHIIDQSVGLEVRIYRAALEFLTDAPAAEPFPVIIFFHGGSFVHSSAS
STIYDSLCRRFVKLSKGVVVSVNYRRAPEHRYPCAYDDGWTALKWVMSQP
FMRSGGDAQARVFLSGDSSGGNIAHHVAVRAADEGVKVCGNILLNAMFGG
TERTESERRLDGKYFVTLQDRDWYWKAYLPEDADRDHPACNPFGPNGRRL
GGLPFAKSLIIVSGLDLTCDRQLAYADALREDGHHVKVVQCENATVGFYL
LPNTVHYHEVMEEISDFLNANLY
3D structure
PDB3ebl Structural basis for gibberellin recognition by its receptor GID1.
ChainA
Resolution1.9 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 3.-.-.-
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 GA4 A F27 G122 S123 I133 Y134 S198 R251 Y254 V326 G327 F13 G92 S93 I103 Y104 S168 R221 Y224 V296 G297 MOAD: Kd=0.5uM
PDBbind-CN: -logKd/Ki=6.30,Kd=0.5uM
Gene Ontology
Molecular Function
GO:0010331 gibberellin binding
GO:0016787 hydrolase activity
Biological Process
GO:0009739 response to gibberellin
GO:0009740 gibberellic acid mediated signaling pathway
GO:0009939 positive regulation of gibberellic acid mediated signaling pathway
GO:0010325 raffinose family oligosaccharide biosynthetic process
GO:0048444 floral organ morphogenesis
Cellular Component
GO:0005634 nucleus
GO:0005737 cytoplasm

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:3ebl, PDBe:3ebl, PDBj:3ebl
PDBsum3ebl
PubMed19037316
UniProtQ6L545|GID1_ORYSJ Gibberellin receptor GID1 (Gene Name=GID1)

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