Structure of PDB 3e6f Chain A

Receptor sequence
>3e6fA (length=273) Species: 10090 (Mus musculus) [Search protein sequence]
SHSLRYFVTAVSRPGFGEPRYMEVGYVDNTEFVRFDSDAENPRYEPRARW
IEQEGPEYWERETRRAKGNEQSFRVDLRTALRYYNQSAGGSHTLQWMAGC
DVESDGRLLRGYWQFAYDGCDYIALNEDLKTWTAADMAAQITRRKWEQAG
AAERDRAYLEGECVEWLRRYLKNGNATLLRTDPPKAHVTHHRRPEGDVTL
RCWALGFYPADITLTWQLNGEELTQEMELVETRPAGDGTFQKWASVVVPL
GKEQKYTCHVEHEGLPEPLTLRW
3D structure
PDB3e6f Different vaccine vectors delivering the same antigen elicit CD8+ T cell responses with distinct clonotype and epitope specificity
ChainA
Resolution2.41 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide A Y7 E63 R66 N70 S73 F74 V76 D77 Y84 W97 W114 T143 K146 W147 A150 A152 Y159 E163 W167 Y171 Y6 E62 R65 N69 S72 F73 V75 D76 Y83 W96 W113 T142 K145 W146 A149 A151 Y158 E162 W166 Y170
External links
PDB RCSB:3e6f, PDBe:3e6f, PDBj:3e6f
PDBsum3e6f
PubMed19620307
UniProtP01900|HA12_MOUSE H-2 class I histocompatibility antigen, D-D alpha chain (Gene Name=H2-D1)

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