Structure of PDB 3dpr Chain A

Receptor sequence
>3dprA (length=269) Species: 12130 (rhinovirus A2) [Search protein sequence]
LVVPNINSSNPTTSNSAPALDAAETGHTSSVQPEDVIETRYVQTSQTRDE
MSLESFLGRSGCIHESKLEVTLANYNKENFTVWAINLQEMAQIRRKFELF
TYTRFDSEITLVPCISALSQDIGHITMQYMYVPPGAPVPNSRDDYAWQSG
TNASVFWQHGQAYPRFSLPFLSVASAYYMFYDGYDEQDQNYGTANTNNMG
SLCSRIVTEKHIHKVHIMTRIYHKAKHVKAWCPRPPRALEYTRAHRTNFK
IEDRSIQTAIVTRPIITTA
3D structure
PDB3dpr Minor group human rhinovirus-receptor interactions: geometry of multimodular attachment and basis of recognition
ChainA
Resolution3.5 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number 2.7.7.48: RNA-directed RNA polymerase.
3.4.22.28: picornain 3C.
3.4.22.29: picornain 2A.
3.6.1.15: nucleoside-triphosphate phosphatase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide A S66 K240 H241 S52 K226 H227
Gene Ontology
Molecular Function
GO:0005198 structural molecule activity

View graph for
Molecular Function
External links
PDB RCSB:3dpr, PDBe:3dpr, PDBj:3dpr
PDBsum3dpr
PubMed19073182
UniProtP04936|POLG_HRV2 Genome polyprotein

[Back to BioLiP]