Structure of PDB 3dc8 Chain A

Receptor sequence
>3dc8A (length=483) Species: 382 (Sinorhizobium meliloti) [Search protein sequence]
STVIKGGTIVTADLTYKADVKVEGGRIVEIGPNLSGAETLDATGCYVMPG
GIDPHTHLEMPFMGTYSSDDFESGTRAALAGGTTMVVDFALPSGQSLLEA
LTMWDNKSTRANCDYSFHMAITWWGEQVFNEMETIVKDKGINTFKHFMAY
KGALMVDDDEMFSSFQRCAALGALPLVHAENGDVVAQLQAKLLAEGNSGP
EAHAYSRPAEVEGEAANRAIMIADMAGCPVYIVHTSCEQAHEAIRRARAK
GMRVFGEPLIQHLTLDETEYFDKDWDHAARRVMSPPFRNKLHQDSLWAGL
ASGSLQVVATDHCAFTTEQKRFGVGDFTRIPNGTGGLEDRMPMLWTYGVA
TGRITMNEFVAVTSTNIAKILNIYPKKGAILVGADADLVVWDPKRSKTIS
AKTQQSAIDYNVFEGKTVTGLPRFTLTRGVVSIEEGTVKTQEGHGEFVRR
DPFPAVSTALSTWKEVTAPRAVQRSGIPASGVH
3D structure
PDB3dc8 Structure of dihydropyrimidinase from Sinorhizobium meliloti CECT4114: new features in an amidohydrolase family member
ChainA
Resolution1.85 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 3.5.2.2: dihydropyrimidinase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 ZN A K147 H180 H236 K145 H178 H234
BS02 ZN A H56 H58 K147 D313 H55 H57 K145 D311
Gene Ontology
Molecular Function
GO:0004157 dihydropyrimidinase activity
GO:0016787 hydrolase activity
GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
GO:0046872 metal ion binding
Cellular Component
GO:0005737 cytoplasm

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Molecular Function
View graph for
Cellular Component
External links
PDB RCSB:3dc8, PDBe:3dc8, PDBj:3dc8
PDBsum3dc8
PubMed19895890
UniProtQ0PQZ5

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