Structure of PDB 3d40 Chain A

Receptor sequence
>3d40A (length=252) Species: 43759 (Streptomyces wedmorensis) [Search protein sequence]
SGLVPRGSHMTPDFLAIKVGGSLFSRKDEPGSLDDDAVTRFARNFARLAE
TYRGRMVLISGGGAFAFSLAGLTEATFEVKKRWAEKLRGIGVDAFPLQLA
AMCTLRNGIPQLRSEVLRDVLDHGALPVLAGDALFDEHGKLWAFSSDRVP
EVLLPMVEGRLRVVTLTDVDGIVTDGDTILPEVDARSPEQAYAALWGSSE
GAMHTKLDALVTCARRGAECFIMRGDPGSDLEFLTAPFSSWPAHVRSTRI
TT
3D structure
PDB3d40 Crystal Structure of Fosfomycin Resistance Kinase FomA from Streptomyces wedmorensis.
ChainA
Resolution1.53 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number 2.7.4.26: isopentenyl phosphate kinase.
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 DPO A K9 G11 G12 G52 G53 D150 K216 K18 G20 G21 G61 G62 D147 K206
Gene Ontology
Molecular Function
GO:0004349 glutamate 5-kinase activity
GO:0005524 ATP binding
GO:0016301 kinase activity
GO:0102043 isopentenyl phosphate kinase activity
Biological Process
GO:0006561 proline biosynthetic process
GO:0008299 isoprenoid biosynthetic process
GO:0016310 phosphorylation
Cellular Component
GO:0005829 cytosol

View graph for
Molecular Function

View graph for
Biological Process

View graph for
Cellular Component
External links
PDB RCSB:3d40, PDBe:3d40, PDBj:3d40
PDBsum3d40
PubMed18701452
UniProtQ56187

[Back to BioLiP]