Structure of PDB 3cmy Chain A
Receptor sequence
>3cmyA (length=60) Species:
9606
(Homo sapiens) [
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GQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVWF
SNRRARWRKQ
3D structure
PDB
3cmy
Structural Basis for DNA Recognition by the Human PAX3 Homeodomain.
Chain
A
Resolution
1.95 Å
3D
structure
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Enzymatic activity
Enzyme Commision number
?
Interaction with ligand
Site
#
Ligand
Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01
dna
A
R2 R3 R5 T6 R44 V47 N51
R3 R4 R6 T7 R45 V48 N52
BS02
dna
A
R2 S4 R5 Y25 S50 R53
R3 S5 R6 Y26 S51 R54
Gene Ontology
Molecular Function
GO:0000981
DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0003677
DNA binding
Biological Process
GO:0006355
regulation of DNA-templated transcription
View graph for
Molecular Function
View graph for
Biological Process
External links
PDB
RCSB:3cmy
,
PDBe:3cmy
,
PDBj:3cmy
PDBsum
3cmy
PubMed
19199574
UniProt
P23760
|PAX3_HUMAN Paired box protein Pax-3 (Gene Name=PAX3)
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