Structure of PDB 3bwr Chain A

Receptor sequence
>3bwrA (length=267) [Search protein sequence]
GIEVLGVKTGVDSFTEVECFLNPQMGNPDEHQKGLSKSLAAEKQFTDDSP
DKEQLPCYSVARIPLPNINEDLTCGNILMWEAVTVKTEVIGVTAMLNLHS
GTQKTHENGAGKPIQGSNFHFFAVGGEPLELQGVLANYRTKYPAQTVTPK
NATVDSQQMNTDHKAVLDKDNAYPVECWVPDPSKNENTRYFGTYTGGENV
PPVLHITNTATTVLLDEQGVGPLCKADSLYVSAVDICGLFTNTSGTQQWK
GLPRYFKITLRKRSVKN
3D structure
PDB3bwr Structural basis of GM1 ganglioside recognition by simian virus 40.
ChainA
Resolution2.25 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 GAL A S68 L69 Q84 T276 S38 L39 Q54 T246
BS02 SIA A Q62 S68 N272 S274 T276 Q278 Q32 S38 N242 S244 T246 Q248
Gene Ontology
Molecular Function
GO:0005198 structural molecule activity
Cellular Component
GO:0019028 viral capsid

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Molecular Function
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Cellular Component
External links
PDB RCSB:3bwr, PDBe:3bwr, PDBj:3bwr
PDBsum3bwr
PubMed18353982
UniProtP03087|VP1_SV40 Major capsid protein VP1

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