Structure of PDB 3art Chain A

Receptor sequence
>3artA (length=570) Species: 669 (Vibrio harveyi) [Search protein sequence]
APTAPSIDMYGSNNLQFSKIELAMETTSGYNDMVKYHELAKIKVKFNQWS
GTSGDTYNVYFDGVKVATGAITGSQTTASFEYGQGGLYQMEIEACDATGC
SKSAPVEITIADTDGSHLKPLTMNVDPNNKSYNTDPSIVMGTYFVEWGIY
GRDYTVDNMPVDNLTHILYGFIPICGPNESVKSVGGNSFNALQTACRGVN
DYEVVIHDPWAAYQKSFPQAGHEYSTPIKGNYAMLMALKQRNPDLKIIPS
IGGGTLSDPFYDFVDKKNRDTFVASVKKFLKTWKFYDGVDIDWEFPGGGG
AAADKGDPVNDGPAYIALMRELRVMLDELEAETGRTYELTSAIGVGYDKI
EDVDYADAVQYMDYIFAMTYDFYGGWNNVPGHQTALYCGSFMRPGQCDGG
GVDENGEPYKGPAYTADNGIQLLLAQGVPANKLVLGTAMYGRGWEGVTPD
TLTDPNDPMTGTATGKLKGSTAQGVWEDGVIDYKGIKSFMLGANNTGING
FEYGYDAQAEAPWVWNRSTGELITFDDHRSVLAKGNYAKSLGLAGLFSWE
IDADNGDILNAMHEGMAGGV
3D structure
PDB3art Potent family-18 chitinase inhibitors: x-ray structures, affinities, and binding mechanisms
ChainA
Resolution2.23 Å
3D
structure
Catalytic site residues are labeled in the structure
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Enzymatic activity
Catalytic site (original residue number in PDB) D311 D313 E315 Y391
Catalytic site (residue number reindexed from 1) D290 D292 E294 Y370
Enzyme Commision number 3.2.1.14: chitinase.
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 DEQ A G320 G321 A322 W397 G299 G300 A301 W376 PDBbind-CN: -logKd/Ki=4.43,Kd=37uM
BS02 DEQ A W168 Y171 N208 S209 D229 W231 W147 Y150 N187 S188 D208 W210 PDBbind-CN: -logKd/Ki=4.43,Kd=37uM
BS03 DEQ A V146 P148 N150 P181 D183 R262 V125 P127 N129 P160 D162 R241 PDBbind-CN: -logKd/Ki=4.43,Kd=37uM
Gene Ontology
Molecular Function
GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0004568 chitinase activity
GO:0008061 chitin binding
Biological Process
GO:0005975 carbohydrate metabolic process
GO:0006032 chitin catabolic process

View graph for
Molecular Function

View graph for
Biological Process
External links
PDB RCSB:3art, PDBe:3art, PDBj:3art
PDBsum3art
PubMed21531720
UniProtQ9AMP1

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