Structure of PDB 2yyr Chain A

Receptor sequence
>2yyrA (length=60) Species: 10090 (Mus musculus) [Search protein sequence]
PVYPCGICTNEVNDDQDAILCEASCQKWFHRICTGMTETAYGLLTAEASA
VWGCDTCMAD
3D structure
PDB2yyr Structural analysis of PHD domain of Pygopus complexed with trimethylated histone H3 peptide
ChainA
Resolution2.5 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 peptide A Y339 V348 N349 D350 A354 I355 L356 E358 W364 Y377 L380 T381 A386 Y3 V12 N13 D14 A18 I19 L20 E22 W28 Y41 L44 T45 A50
BS02 ZN A C341 C344 H366 C369 C5 C8 H30 C33
BS03 ZN A C357 C361 C390 C393 C21 C25 C54 C57
External links
PDB RCSB:2yyr, PDBe:2yyr, PDBj:2yyr
PDBsum2yyr
PubMed
UniProtQ9D0P5|PYGO1_MOUSE Pygopus homolog 1 (Gene Name=Pygo1)

[Back to BioLiP]