Structure of PDB 2yhg Chain A

Receptor sequence
>2yhgA (length=411) Species: 203122 (Saccharophagus degradans 2-40) [Search protein sequence]
GRYRVIHTTDMGADPDDEQSLVRQLVMANEYDLEGIITTTGCWKKSTSNT
AYVDRILNAYSQAYPNLSKHAEGFPTPAYLDSINVMGQRGYGMGDVGSGK
DSAGSNLIIAAVDKDDPRPVWATCWGGCNTIAQAVWKVQNTRSQAQLDAF
ISKLRVYDILGQDNAGTWLAKNFPNLIYIRARSVYSWQPSDSYLDNHIQS
HGALGAVYPNRRYATEGDTPAFLHMANPGLNDPSVVSMGGWGGRFPSKQA
GVRGMSCMSGEDAVYDTYYMYTENGESIKRWSTAIHNDFQARMDWAIESN
YSAANHHPVPVVNNDANEAVMYLNASAGSTVSLDASGSSDPDGDSLNYSW
SHYGEADSYSGSVSISNSSSASANVQIPSNAGGKDIHILLTLRDNGSPNL
YAYRRVVINVQ
3D structure
PDB2yhg Ab initio phasing of a nucleoside hydrolase-related hypothetical protein from Saccharophagus degradans that is associated with carbohydrate metabolism.
ChainA
Resolution1.08 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 CA A D532 D539 W647 D740 D10 D17 W125 D218
BS02 CA A N827 H828 D862 D864 D866 D916 N305 H306 D340 D342 D344 D394
BS03 MG A G876 D879 Y881 G354 D357 Y359
BS04 MG A Q721 S722 G724 A728 Q199 S200 G202 A206
BS05 MG A G761 G762 G765 S799 G239 G240 G243 S277
BS06 ZN A H723 D816 H201 D294
Gene Ontology
Molecular Function
GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds

View graph for
Molecular Function
External links
PDB RCSB:2yhg, PDBe:2yhg, PDBj:2yhg
PDBsum2yhg
PubMed21905122
UniProtQ21PD3

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