Structure of PDB 2vq1 Chain A

Receptor sequence

>2vq1A (length=216) Species: 10090 (Mus musculus) [Search protein sequence]

DVVMTQTPLSLSVSLGDQASISCRSSQSLVHSNGNTFLQWYLQKPGQSPK
LLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRMEAEDLGIYFCSQTTHVP
WTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDIN
VKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCE
ATHKTSTSPIVKSFNR

3D structure

PDB

2vq1 Characterization of a Diagnostic Fab Fragment Binding Trimeric Lewis X.

Chain

Resolution

2.5 Å

3D
structure

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Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	GLY	A	L160 S176 T178	L165 S181 T183
BS02	GLY	A	K39 K45 F62 E81 D82	K44 K50 F67 E86 D87

External links

PDB	RCSB:2vq1, PDBe:2vq1, PDBj:2vq1
PDBsum	2vq1
PubMed	19173313

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