Structure of PDB 2vla Chain A

Receptor sequence
>2vlaA (length=280) Species: 1408 (Bacillus pumilus) [Search protein sequence]
MNYNPEEQFRCTIIRGKAKNMLDNLLPAYANIIDDICPCDKASFVKDFNN
RLIEILGEETTKKTLDNHRTEIAGKLFGMFYEDDEVIFPSGRTNKYIEDS
DQPAFFKDICFKFQFPNGMDKLDKVIEKVGAKIQIRQFPYILQVLLTADN
NNIQLSKDDIAYYVLNSLQVLQGKIKPIEVIEKIIEDRSNDITKKVRHPG
KETSYSMQHIREQLNYLELANLIRIDGNLVKLNYREAENINYIAQFWGNK
PEFNAYKYDFTSEDDKKSFFKDWQQYYSNV
3D structure
PDB2vla The Recognition Domain of the Bpuji Restriction Endonuclease in Complex with Cognate DNA at 1.3-A Resolution.
ChainA
Resolution1.3 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 3.1.21.4: type II site-specific deoxyribonuclease.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 dna A R15 K63 N67 T70 E71 K75 M119 D120 K121 K124 K201 E202 S204 Y205 R15 K63 N67 T70 E71 K75 M119 D120 K121 K124 K201 E202 S204 Y205 PDBbind-CN: Kd=7.3nM
BS02 dna A R15 G16 K17 K19 N20 T61 K63 T64 N67 H68 K121 L122 Q208 R211 R15 G16 K17 K19 N20 T61 K63 T64 N67 H68 K121 L122 Q208 R211 PDBbind-CN: Kd=7.3nM
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