Structure of PDB 2vf8 Chain A

Receptor sequence
>2vf8A (length=806) Species: 1299 (Deinococcus radiodurans) [Search protein sequence]
FPDGGFVQVRGARQHNLKDISVKVPRDALVVFTGVSGSGKSSLAFGTLYA
EAQRRYLESVSPYARRLFNQVPDVDAIDGLPPAVALQQARGTPTARSSVG
SVTTLSNLLRMLYSRAGDYPPGQGIVYAEGFSPNTPEGACPECHGLGRVY
TVTEDSMVPDPSLTIRERAVAAWPQAWGGQNQRDILVTLGIDVDVPWREL
PEETRHWILFTDEQPVVPVYPGLTPAETQRALKKKMEPSYMGTFSSARRH
VLHTFANTESASMKKRVQGYMISEECPLCHGKRLRQEALNVTFAGLDITE
LSRLPLARVSELLRPYAEEREPGHAERVKNRPEQAIALQRMAADLVKRLD
VLLHLGLGYLGLDRSTPTLSPGELQRLRLATQLYSNLFGVVYVLDEPSAG
LHPADTEALLSALENLKRGGNSLFVVEHDLDVIRRADWLVDVGPEAGEKG
GEILYSGPPEGLKHVPESQTGQYLFADEPHTPREPAGWLELNGVTRNNLD
NLDVRFPLGVMTSVTGVSGSGKSTLVSQALVDALAAHFGQGSARLGGDLA
QITRLVRVDQKPIGRTPRSNMATYTGLFDQVRKLFAATPLAKKRGYNAGR
FSFNVKGGRCEHCQGEGWVMVPSVYAPCPVCHGTRYNAETLEVEYRGKNI
ADVLALTVDEAHDFFADESAIFRALDTLREVGLGYLRLGQPATELSGGEA
QRIKLATELRRSGRGGTVYVLDEPTTGLHPADVERLQRQLVKLVDAGNTV
IAVEHKMQVVAASDWVLDIGPGAGEDGGRLVAQGTPAEVAQAAGSVTAPY
LRAALR
3D structure
PDB2vf8 Structural and Mutational Analyses of Deinococcus Radiodurans Uvra2 Provide Insight Into DNA Binding and Damage Recognition by Uvras.
ChainA
Resolution3.0 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 ADP A H24 N25 S45 G46 S47 G48 K49 S50 S51 R101 E730 H15 N16 S36 G37 S38 G39 K40 S41 S42 R90 E694
BS02 ADP A Y370 R375 N511 N512 G533 G535 K536 S537 T538 Y359 R364 N497 N498 G519 G521 K522 S523 T524
BS03 ZN A C154 C287 C290 C143 C276 C279
BS04 ZN A C644 C667 C613 C631
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0004518 nuclease activity
GO:0005524 ATP binding
GO:0016887 ATP hydrolysis activity
GO:0042802 identical protein binding
GO:0046872 metal ion binding
Biological Process
GO:0006281 DNA repair
GO:0006289 nucleotide-excision repair
Cellular Component
GO:0005737 cytoplasm
GO:0009380 excinuclease repair complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:2vf8, PDBe:2vf8, PDBj:2vf8
PDBsum2vf8
PubMed19368888
UniProtQ9RYW8

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