Structure of PDB 2vcd Chain A

Receptor sequence
>2vcdA (length=137) Species: 272624 (Legionella pneumophila subsp. pneumophila str. Philadelphia 1) [Search protein sequence]
FNKKADENKVKGEAFLTENKNKPGVVVLPSGLQYKVINSGNGVKPGKSDT
VTVEYTGRLIDGTVFDSTEKTGKPATFQVSQVIPGWTEALQLMPAGSTWE
IYVPSGLAYGPRSVGGPIGPNETLIFKIHLISVKKSS
3D structure
PDB2vcd Solution structure of the Legionella pneumophila Mip-rapamycin complex.
ChainA
ResolutionN/A
3D
structure
Catalytic site residues are labeled in the structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Catalytic site (original residue number in PDB) Y55 F65 D66 I83 Y109 F126
Catalytic site (residue number reindexed from 1) Y55 F65 D66 I83 Y109 F126
Enzyme Commision number 5.2.1.8: peptidylprolyl isomerase.
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 RAP A Y55 F65 D66 F77 Q81 V82 I83 P84 W86 Y109 Y55 F65 D66 F77 Q81 V82 I83 P84 W86 Y109
Gene Ontology
Molecular Function
GO:0003755 peptidyl-prolyl cis-trans isomerase activity
Biological Process
GO:0006457 protein folding

View graph for
Molecular Function

View graph for
Biological Process
External links
PDB RCSB:2vcd, PDBe:2vcd, PDBj:2vcd
PDBsum2vcd
PubMed18366641
UniProtQ5ZXE0|MIP_LEGPH Outer membrane protein MIP (Gene Name=mip)

[Back to BioLiP]