Structure of PDB 2rgo Chain A

Receptor sequence
>2rgoA (length=557) Species: 1306 (Streptococcus sp.) [Search protein sequence]
MFSNKTRQDSIQKMQQEELDLLIIGGGITGAGVAVQAAASGIKTGLIEMQ
DFAEGTSSRSTKLVHGGIRYLKTFDVEVVADTVGERAVVQGIAPHIPKPD
PMLLPIYEDEGATTFNMFSVKVAMDLYDKLANVTGTKYENYTLTPEEVLE
REPFLKKEGLKGAGVYLDFRNNDARLVIDNIKKAAEDGAYLVSKMKAVGF
LYEGDQIVGVKARDLLTDEVIEIKAKLVINTSGPWVDKVRNLNFTRPVSP
KMRPTKGIHLVVDAKKLPVPQPTYFDTGKQDGRMVFAIPRENKTYFGTTD
TDYQGDFTDPKVTQEDVDYLLDVINHRYPEANITLADIEASWAGLRPLLI
GNSGSDYNGGTISRGSSLEREPDGLLTLSGGKITDYRKMAEGALRLIRQL
LKEEYGIETKEIDSKKYQISGGNFDPTKLEETVTELAKEGVAAGLEEEDA
TYIADFYGTNARRIFELAKEAPYPGLSLAESARLRYGLEEEMVLAPGDYL
IRRTNHLLFERDQLDEIKQPVIDAIAEYFGWTEEEKAQQTKRLEALIAES
DLRELKG
3D structure
PDB2rgo Structure of alpha-glycerophosphate oxidase from Streptococcus sp.: a template for the mitochondrial alpha-glycerophosphate dehydrogenase.
ChainA
Resolution2.4 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 1.1.3.21: glycerol-3-phosphate oxidase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 FAD A G25 I28 T29 E48 M49 Q50 T56 S57 A197 S232 G233 W235 G257 G344 L345 Y357 K429 I430 T431 G25 I28 T29 E48 M49 Q50 T56 S57 A197 S232 G233 W235 G257 G344 L345 Y357 K382 I383 T384
Gene Ontology
Molecular Function
GO:0000166 nucleotide binding
GO:0004368 glycerol-3-phosphate dehydrogenase (quinone) activity
GO:0004369 glycerol-3-phosphate oxidase activity
Biological Process
GO:0006071 glycerol metabolic process
GO:0006072 glycerol-3-phosphate metabolic process
GO:0006796 phosphate-containing compound metabolic process
GO:0019637 organophosphate metabolic process
Cellular Component
GO:0016020 membrane

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:2rgo, PDBe:2rgo, PDBj:2rgo
PDBsum2rgo
PubMed18154320
UniProtD0VWP7

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