Structure of PDB 2ram Chain A

Receptor sequence
>2ramA (length=273) Species: 10090 (Mus musculus) [Search protein sequence]
PYVEIIEQPKQRGMRFRYKCEGRSAGSIPGERSTDTTKTHPTIKINGYTG
PGTVRISLVTKDPPHRPHPHELVGKDCRDGYYEADLCPDRSIHSFQNLGI
QCVKKRDLEQAISQRIQTNNNPFHVPIEEQRGDYDLNAVRLCFQVTVRDP
AGRPLLLTPVLSHPIFDNRAPNTAELKICRVNRNSGSCLGGDEIFLLCDK
VQKEDIEVYFTGPGWEARGSFSQADVHRQVAIVFRTPPYADPSLQAPVRV
SMQLRRPSDRELSEPMEFQYLPD
3D structure
PDB2ram A novel DNA recognition mode by the NF-kappa B p65 homodimer.
ChainA
Resolution2.4 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 dna A Y36 C38 E39 K122 K123 R187 P189 Q220 K221 Q247 Y18 C20 E21 K104 K105 R169 P171 Q202 K203 Q229
BS02 dna A R33 R35 S42 G44 R15 R17 S24 G26
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0003700 DNA-binding transcription factor activity
Biological Process
GO:0006355 regulation of DNA-templated transcription
Cellular Component
GO:0005737 cytoplasm

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:2ram, PDBe:2ram, PDBj:2ram
PDBsum2ram
PubMed9437432
UniProtQ04207|TF65_MOUSE Transcription factor p65 (Gene Name=Rela)

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