Structure of PDB 2pak Chain A

Receptor sequence
>2pakA (length=135) Species: 143495 (Aneurinibacillus thermoaerophilus) [Search protein sequence]
ENKVINFKKIIDSRGSLVAIEENKNIPFSIKRVYYIFDTKGEEPRGFHAN
KKLEQVLVCLNGSCRVILDDGNIIQEITLDSPAVGLYVGPAVWHEMHDFS
SDCVMMVLASDYYDETDYIRQYDNFKKYIAKINLE
3D structure
PDB2pak The X-ray Structure of dTDP-4-Keto-6-deoxy-D-glucose-3,4-ketoisomerase.
ChainA
Resolution2.4 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number 5.3.2.3: TDP-4-oxo-6-deoxy-alpha-D-glucose-3,4-oxoisomerase (dTDP-3-dehydro-6- deoxy-alpha-D-galactopyranose-forming).
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 TYD A R33 Y35 Y114 R121 R32 Y34 Y113 R120
BS02 TYD A R15 L18 R14 L17
Gene Ontology
Molecular Function
GO:0016853 isomerase activity

View graph for
Molecular Function
External links
PDB RCSB:2pak, PDBe:2pak, PDBj:2pak
PDBsum2pak
PubMed17459872
UniProtQ6T1W8|FDTA_ANETH TDP-4-oxo-6-deoxy-alpha-D-glucose-3,4-oxoisomerase (Gene Name=fdtA)

[Back to BioLiP]