Structure of PDB 2oog Chain A

Receptor sequence
>2oogA (length=267) Species: 158879 (Staphylococcus aureus subsp. aureus N315) [Search protein sequence]
QWHTNLTNERFTTIAHRGASGYAPEHTFQAYDKSHNELKASYIEIDLQRT
KDGHLVAMHDETVNRTTNGHGKVEDYTLDELKQLDAGSWFNKKYPKYARA
SYKNAKVPTLDEILERYGPNANYYIETKSPDVYPGMEEQLLASLKKHHLL
NNNKLKNGHVMIQSFSDESLKKIHRQNKHVPLVKLVDKGELQQFNDQRLK
EIRSYAIGLGPDYTDLTEQNTHHLKDLGFIVHPYTVNEKADMLRLNKYGV
DGVFTNFADKYKEVIKE
3D structure
PDB2oog Crystal Structure of Glycerophosphoryl Diester Phosphodiesterase from Staphylococcus Aureus
ChainA
Resolution2.2 Å
3D
structure
Catalytic site residues are labeled in the structure
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Enzymatic activity
Catalytic site (original residue number in PDB) H59 R60 E87 D89 H102 E169 K171 N299
Catalytic site (residue number reindexed from 1) H16 R17 E44 D46 H59 E126 K128 N256
Enzyme Commision number 3.1.4.46: glycerophosphodiester phosphodiesterase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 ZN A E87 D89 E169 E44 D46 E126
Gene Ontology
Molecular Function
GO:0008081 phosphoric diester hydrolase activity
GO:0046872 metal ion binding
Biological Process
GO:0006629 lipid metabolic process

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Molecular Function
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Biological Process
External links
PDB RCSB:2oog, PDBe:2oog, PDBj:2oog
PDBsum2oog
PubMed
UniProtA0A0H3K7S1

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